PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010102326.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family Trihelix
Protein Properties Length: 452aa    MW: 51587.7 Da    PI: 5.9705
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010102326.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix68.91e-21122218185
        trihelix   1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfd 83 
                     +Wt++ v++Li+++  ++++   +            +kk++W+ vsk m ++g+++sp+qC++k+++lnkryk+++++ +++ +++++++ ++ d
  XP_010102326.1 122 KWTDNVVKLLIAVVACVGDDGMVAGgeglkrksgilQKKGKWKTVSKIMISKGCHVSPQQCEDKFNDLNKRYKRLNDILGRGtSCRVVENPALMD 216
                     7**************888888864334666677888**********************************************6699999998888 PP

        trihelix  84 ql 85 
                     ++
  XP_010102326.1 217 SM 218
                     87 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138372.7E-18120245No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 452 aa     Download sequence    Send to blast
MDSSGLGGGF LSGPNGGILD LESPMHRHQT RQLGHSSLAH QHHMSVMGGV EDEPHPISLM  60
EVKGSASKGV SMFGKGKGVA PINGNHGYNL SEEDEPSYME DGSGENFDGV KGKKGSPWQR  120
MKWTDNVVKL LIAVVACVGD DGMVAGGEGL KRKSGILQKK GKWKTVSKIM ISKGCHVSPQ  180
QCEDKFNDLN KRYKRLNDIL GRGTSCRVVE NPALMDSMPH LSAKAKDDVR KILSSKHLFY  240
KEMCAYHNGQ RILDCHDIDL QGYSLPLERC SKDNNGSDEE EAEENHDSED DDLDNEDDNN  300
DDNDGERMTE FGDRKKVNEE DFHFWTSPQD SFEGEMARFF QDPTKSLWER REWVKKQMMQ  360
LEVQRVNVQA EALELEKQRF RWLRYCSKKD RELERLRLEN ERMKLENERK VLQLRQKELE  420
LDLRRSEASL EHSSLGIDRL QGRDQIDLGR HQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010102326.10.0hypothetical protein L484_015274
TrEMBLW9S6Z60.0W9S6Z6_9R
STRINGVIT_07s0031g02800.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF105463240
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21200.18e-70sequence-specific DNA binding transcription factors